2zx8: Difference between revisions

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==alpha-L-fucosidase complexed with inhibitor, F10-2C-O==
==alpha-L-fucosidase complexed with inhibitor, F10-2C-O==
<StructureSection load='2zx8' size='340' side='right' caption='[[2zx8]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
<StructureSection load='2zx8' size='340' side='right'caption='[[2zx8]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2zx8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZX8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZX8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2zx8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZX8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZX8 FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZX8:N-{[(2R,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-METHYLPIPERIDIN-2-YL]METHYL}-1-BENZOFURAN-2-CARBOXAMIDE'>ZX8</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1hl8|1hl8]], [[2zwy|2zwy]], [[2zwz|2zwz]], [[2zx5|2zx5]], [[2zx6|2zx6]], [[2zx7|2zx7]], [[2zx9|2zx9]], [[2zxa|2zxa]], [[2zxb|2zxb]], [[2zxd|2zxd]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZX8:N-{[(2R,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-METHYLPIPERIDIN-2-YL]METHYL}-1-BENZOFURAN-2-CARBOXAMIDE'>ZX8</scene></td></tr>
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-L-fucosidase Alpha-L-fucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.51 3.2.1.51] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zx8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zx8 OCA], [https://pdbe.org/2zx8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zx8 RCSB], [https://www.ebi.ac.uk/pdbsum/2zx8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zx8 ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zx8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zx8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zx8 RCSB], [http://www.ebi.ac.uk/pdbsum/2zx8 PDBsum]</span></td></tr>
</table>
<table>
== Function ==
[https://www.uniprot.org/uniprot/Q9WYE2_THEMA Q9WYE2_THEMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zx/2zx8_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zx/2zx8_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zx8 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Alpha-L-fucosidase]]
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Ho, C W.]]
[[Category: Ho C-W]]
[[Category: Ko, T P.]]
[[Category: Ko T-P]]
[[Category: Lin, C H.]]
[[Category: Lin C-H]]
[[Category: Wang, A H.J.]]
[[Category: Wang AH-J]]
[[Category: Wu, H J.]]
[[Category: Wu H-J]]
[[Category: Hydrolase]]
[[Category: Tim barrel]]

Latest revision as of 11:10, 23 October 2024

alpha-L-fucosidase complexed with inhibitor, F10-2C-Oalpha-L-fucosidase complexed with inhibitor, F10-2C-O

Structural highlights

2zx8 is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.33Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9WYE2_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2zx8, resolution 2.33Å

Drag the structure with the mouse to rotate

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OCA