3ffy: Difference between revisions
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New page: '''Unreleased structure''' The entry 3ffy is ON HOLD Authors: OSIPIUK, J., VOLKART, L., COBB, G., KIM, Y., JOACHIMIAK, A. Description: Putative tetrapyrrole (corrin/porphyrin) methyltr... |
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==Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.== | |||
<StructureSection load='3ffy' size='340' side='right'caption='[[3ffy]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3ffy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FFY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FFY FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ffy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ffy OCA], [https://pdbe.org/3ffy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ffy RCSB], [https://www.ebi.ac.uk/pdbsum/3ffy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ffy ProSAT], [https://www.topsan.org/Proteins/MCSG/3ffy TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q5LHP3_BACFN Q5LHP3_BACFN] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/3ffy_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ffy ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacteroides fragilis NCTC 9343]] | |||
[[Category: Large Structures]] | |||
[[Category: Cobb G]] | |||
[[Category: Joachimiak A]] | |||
[[Category: Kim Y]] | |||
[[Category: Osipiuk J]] | |||
[[Category: Volkart L]] | |||
Latest revision as of 12:07, 30 October 2024
Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.
Structural highlights
FunctionQ5LHP3_BACFN Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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