3ffy: Difference between revisions
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<StructureSection load='3ffy' size='340' side='right'caption='[[3ffy]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='3ffy' size='340' side='right'caption='[[3ffy]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3ffy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[3ffy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FFY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FFY FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ffy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ffy OCA], [https://pdbe.org/3ffy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ffy RCSB], [https://www.ebi.ac.uk/pdbsum/3ffy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ffy ProSAT], [https://www.topsan.org/Proteins/MCSG/3ffy TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ffy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ffy OCA], [https://pdbe.org/3ffy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ffy RCSB], [https://www.ebi.ac.uk/pdbsum/3ffy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ffy ProSAT], [https://www.topsan.org/Proteins/MCSG/3ffy TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/Q5LHP3_BACFN Q5LHP3_BACFN] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/3ffy_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/3ffy_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 23: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Bacteroides fragilis NCTC 9343]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Cobb | [[Category: Cobb G]] | ||
[[Category: Joachimiak | [[Category: Joachimiak A]] | ||
[[Category: Kim | [[Category: Kim Y]] | ||
[[Category: Osipiuk J]] | |||
[[Category: Osipiuk | [[Category: Volkart L]] | ||
[[Category: Volkart | |||
Latest revision as of 12:07, 30 October 2024
Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.
Structural highlights
FunctionQ5LHP3_BACFN Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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