3ey8: Difference between revisions

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{{Seed}}
[[Image:3ey8.png|left|200px]]


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==Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1==
The line below this paragraph, containing "STRUCTURE_3ey8", creates the "Structure Box" on the page.
<StructureSection load='3ey8' size='340' side='right'caption='[[3ey8]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ey8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EY8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EY8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3ey8|  PDB=3ey8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ey8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ey8 OCA], [https://pdbe.org/3ey8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ey8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ey8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ey8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ey8 TOPSAN]</span></td></tr>
 
</table>
===Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9K3D3_VIBCH Q9K3D3_VIBCH]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3EY8 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EY8 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/3ey8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ey8 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
[[Category: Boucher, Y.]]
[[Category: Boucher Y]]
[[Category: Chang, C.]]
[[Category: Chang C]]
[[Category: Cui, H.]]
[[Category: Cui H]]
[[Category: Curmi, P M.G.]]
[[Category: Curmi PMG]]
[[Category: Deshpande, C N.]]
[[Category: Deshpande CN]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Harrop, S J.]]
[[Category: Harrop SJ]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Mabbutt BC]]
[[Category: Mabbutt, B C.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Sureshan V]]
[[Category: Sureshan, V.]]
[[Category: Xu X]]
[[Category: Xu, X.]]
[[Category: Dioxygenase]]
[[Category: Integron cassette protein]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 10:53:15 2009''

Latest revision as of 12:05, 30 October 2024

Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1

Structural highlights

3ey8 is a 2 chain structure with sequence from Vibrio cholerae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9K3D3_VIBCH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ey8, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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