3ey8: Difference between revisions
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==Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1== | ==Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1== | ||
<StructureSection load='3ey8' size='340' side='right' caption='[[3ey8]], [[Resolution|resolution]] 1.60Å' scene=''> | <StructureSection load='3ey8' size='340' side='right'caption='[[3ey8]], [[Resolution|resolution]] 1.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3ey8]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3ey8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EY8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EY8 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ey8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ey8 OCA], [https://pdbe.org/3ey8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ey8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ey8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ey8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ey8 TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9K3D3_VIBCH Q9K3D3_VIBCH] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/3ey8_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/3ey8_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ey8 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Vibrio cholerae]] | [[Category: Vibrio cholerae]] | ||
[[Category: Boucher | [[Category: Boucher Y]] | ||
[[Category: Chang | [[Category: Chang C]] | ||
[[Category: Cui | [[Category: Cui H]] | ||
[[Category: Curmi | [[Category: Curmi PMG]] | ||
[[Category: Deshpande | [[Category: Deshpande CN]] | ||
[[Category: Edwards | [[Category: Edwards A]] | ||
[[Category: Harrop | [[Category: Harrop SJ]] | ||
[[Category: Joachimiak | [[Category: Joachimiak A]] | ||
[[Category: Mabbutt BC]] | |||
[[Category: Mabbutt | [[Category: Savchenko A]] | ||
[[Category: Savchenko | [[Category: Sureshan V]] | ||
[[Category: Sureshan | [[Category: Xu X]] | ||
[[Category: Xu | |||
Latest revision as of 12:05, 30 October 2024
Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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