3eag: Difference between revisions

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{{Seed}}
[[Image:3eag.png|left|200px]]


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==The crystal structure of UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (MPL) from Neisseria meningitides==
The line below this paragraph, containing "STRUCTURE_3eag", creates the "Structure Box" on the page.
<StructureSection load='3eag' size='340' side='right'caption='[[3eag]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3eag]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EAG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EAG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3eag|  PDB=3eag  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eag FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eag OCA], [https://pdbe.org/3eag PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eag RCSB], [https://www.ebi.ac.uk/pdbsum/3eag PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eag ProSAT], [https://www.topsan.org/Proteins/MCSG/3eag TOPSAN]</span></td></tr>
 
</table>
===The crystal structure of UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (MPL) from Neisseria meningitides===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9JRY9_NEIMB Q9JRY9_NEIMB]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3EAG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_mc58 Neisseria meningitidis mc58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EAG OCA].  
Check<jmol>
[[Category: Neisseria meningitidis mc58]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/3eag_consurf.spt"</scriptWhenChecked>
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Atp-binding]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ligase]]
  </jmolCheckbox>
[[Category: Mcsg]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eag ConSurf].
[[Category: Midwest center for structural genomic]]
<div style="clear:both"></div>
[[Category: Neisseria meningitidis mc58]]
__TOC__
[[Category: Nucleotide-binding]]
</StructureSection>
[[Category: Protein structure initiative]]
[[Category: Large Structures]]
[[Category: Psi-2]]
[[Category: Neisseria meningitidis MC58]]
[[Category: Structural genomic]]
[[Category: Chang C]]
[[Category: Udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase]]
[[Category: Clancy S]]
 
[[Category: Hendricks R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb  4 20:15:37 2009''
[[Category: Joachimiak A]]

Latest revision as of 12:03, 30 October 2024

The crystal structure of UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (MPL) from Neisseria meningitidesThe crystal structure of UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (MPL) from Neisseria meningitides

Structural highlights

3eag is a 2 chain structure with sequence from Neisseria meningitidis MC58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.55Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9JRY9_NEIMB

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3eag, resolution 2.55Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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