3ds8: Difference between revisions

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-==The crysatl structure of the gene lin2722 products from Listeria innocua==
-<StructureSection load='3ds8' size='340' side='right' caption='[[3ds8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+==The crystal structure of the gene lin2722 products from Listeria innocua==
+<StructureSection load='3ds8' size='340' side='right'caption='[[3ds8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3ds8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"listeria_innocua"_seeliger_and_schoofs_1979 "listeria innocua" seeliger and schoofs 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DS8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DS8 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3ds8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DS8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DS8 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin2722 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 "Listeria innocua" Seeliger and Schoofs 1979])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ds8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ds8 OCA], [https://pdbe.org/3ds8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ds8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ds8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ds8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ds8 TOPSAN]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ds8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ds8 OCA], [http://pdbe.org/3ds8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ds8 RCSB], [http://www.ebi.ac.uk/pdbsum/3ds8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3ds8 TOPSAN]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q927R6_LISIN Q927R6_LISIN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/3ds8_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/3ds8_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 20: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Listeria innocua seeliger and schoofs 1979]]
+[[Category: Large Structures]]
-[[Category: Freeman, L]]
+[[Category: Listeria innocua]]
-[[Category: Joachimiak, A]]
+[[Category: Freeman L]]
-[[Category: Structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Wu, R]]
+[[Category: Wu R]]
-[[Category: Zhang, R]]
+[[Category: Zhang R]]
-[[Category: Lin2722]]
-[[Category: Mcsg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Unknown function]]
-[[Category: Unkonwn function]]