3df7: Difference between revisions

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[[Image:3df7.jpg|left|200px]]


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==Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus==
The line below this paragraph, containing "STRUCTURE_3df7", creates the "Structure Box" on the page.
<StructureSection load='3df7' size='340' side='right'caption='[[3df7]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DF7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.87&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3df7|  PDB=3df7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3df7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df7 OCA], [https://pdbe.org/3df7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3df7 RCSB], [https://www.ebi.ac.uk/pdbsum/3df7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3df7 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3df7 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3DF7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF7 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3df7_consurf.spt"</scriptWhenChecked>
[[Category: Archaeoglobus fulgidus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3df7 ConSurf].
[[Category: Sugadev, R.]]
<div style="clear:both"></div>
[[Category: Swaminathan, S.]]
__TOC__
[[Category: 10040d]]
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Large Structures]]
[[Category: Atp-grasp superfamily]]
[[Category: Burley SK]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Sugadev R]]
[[Category: New york structural genomix research consortium]]
[[Category: Swaminathan S]]
[[Category: Nysgrc.]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-ii]]
[[Category: Putative protein]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug  6 13:04:16 2008''

Latest revision as of 11:58, 30 October 2024

Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidusCrystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.87Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3df7, resolution 1.87Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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