3dby: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)==
==Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)==
<StructureSection load='3dby' size='340' side='right' caption='[[3dby]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3dby' size='340' side='right'caption='[[3dby]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3dby]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_g9241 Bacillus cereus g9241]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DBY FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DBY FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BCE_G9241_0798 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269801 Bacillus cereus G9241])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dby OCA], [http://pdbe.org/3dby PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dby RCSB], [http://www.ebi.ac.uk/pdbsum/3dby PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dby TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dby OCA], [https://pdbe.org/3dby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dby RCSB], [https://www.ebi.ac.uk/pdbsum/3dby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dby ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3dby TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 11: Line 12:
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dby_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dby_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 19: Line 20:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus cereus g9241]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Bonanno, J B]]
[[Category: Bonanno JB]]
[[Category: Burley, S K]]
[[Category: Burley SK]]
[[Category: Freeman, J]]
[[Category: Freeman J]]
[[Category: Groshong, C]]
[[Category: Groshong C]]
[[Category: Hu, S]]
[[Category: Hu S]]
[[Category: Structural genomic]]
[[Category: Ozyurt S]]
[[Category: Ozyurt, S]]
[[Category: Ramagopal UA]]
[[Category: Ramagopal, U A]]
[[Category: Rodgers L]]
[[Category: Rodgers, L]]
[[Category: Wasserman S]]
[[Category: Wasserman, S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 11:58, 30 October 2024

Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dby, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA