3d7n: Difference between revisions

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[[Image:3d7n.png|left|200px]]


<!--
==The crystal structure of the flavodoxin, WrbA-like protein from Agrobacterium tumefaciens==
The line below this paragraph, containing "STRUCTURE_3d7n", creates the "Structure Box" on the page.
<StructureSection load='3d7n' size='340' side='right'caption='[[3d7n]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d7n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D7N FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3d7n|  PDB=3d7n  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d7n OCA], [https://pdbe.org/3d7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d7n RCSB], [https://www.ebi.ac.uk/pdbsum/3d7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d7n ProSAT], [https://www.topsan.org/Proteins/MCSG/3d7n TOPSAN]</span></td></tr>
 
</table>
===The crystal structure of the flavodoxin, WrbA-like protein from Agrobacterium tumefaciens===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CG77_AGRFC A9CG77_AGRFC]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3d7n]] is a 1 chain structure of [[Flavodoxin]] with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7N OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/3d7n_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d7n ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Flavodoxin]]
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
[[Category: Agrobacterium tumefaciens str. c58]]
__TOC__
[[Category: Edwards, A.]]
</StructureSection>
[[Category: Gu, J.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Joachimiak, A.]]
[[Category: Large Structures]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Edwards A]]
[[Category: Savchenko, A.]]
[[Category: Gu J]]
[[Category: Xu, X.]]
[[Category: Joachimiak A]]
[[Category: Zhang, R.]]
[[Category: Savchenko A]]
[[Category: Electron transport]]
[[Category: Xu X]]
[[Category: Flavodoxin]]
[[Category: Zhang R]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Wrba-like protein]]

Latest revision as of 08:45, 17 October 2024

The crystal structure of the flavodoxin, WrbA-like protein from Agrobacterium tumefaciensThe crystal structure of the flavodoxin, WrbA-like protein from Agrobacterium tumefaciens

Structural highlights

3d7n is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CG77_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3d7n, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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