3d6w: Difference between revisions

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-[[Image:3d6w.png|left|200px]]
-{{STRUCTURE_3d6w|  PDB=3d6w  |  SCENE=  }}
+==LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.==
+<StructureSection load='3d6w' size='340' side='right'caption='[[3d6w]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-===LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3d6w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_10987 Bacillus cereus ATCC 10987]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D6W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D6W FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[3d6w]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D6W OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d6w OCA], [https://pdbe.org/3d6w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d6w RCSB], [https://www.ebi.ac.uk/pdbsum/3d6w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d6w ProSAT], [https://www.topsan.org/Proteins/MCSG/3d6w TOPSAN]</span></td></tr>
-[[Category: Bacillus cereus]]
+</table>
-[[Category: Edwards, A M.]]
+== Function ==
-[[Category: Evdokimova, E.]]
+[https://www.uniprot.org/uniprot/Q73A38_BACC1 Q73A38_BACC1]
-[[Category: Joachimiak, A.]]
+== Evolutionary Conservation ==
-[[Category: Kudritska, M.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+Check<jmol>
-[[Category: Osipiuk, J.]]
+  <jmolCheckbox>
-[[Category: Savchenko, A.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d6/3d6w_consurf.spt"</scriptWhenChecked>
-[[Category: Apc7590]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Dna binding protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Lyttr dna-binding domain]]
+  </jmolCheckbox>
-[[Category: Mcsg]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d6w ConSurf].
-[[Category: Methyl-accepting/dna response regulator]]
+<div style="clear:both"></div>
-[[Category: Midwest center for structural genomic]]
+__TOC__
-[[Category: Protein structure initiative]]
+</StructureSection>
-[[Category: Psi-2]]
+[[Category: Bacillus cereus ATCC 10987]]
-[[Category: Structural genomic]]
+[[Category: Large Structures]]
+[[Category: Edwards AM]]
+[[Category: Evdokimova E]]
+[[Category: Joachimiak A]]
+[[Category: Kudritska M]]
+[[Category: Osipiuk J]]
+[[Category: Savchenko A]]