2vu7: Difference between revisions

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[[Image:2vu7.jpg|left|200px]]


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==Atomic resolution (1.08 A) structure of purified thaumatin I grown in sodium meso-tartrate at 4 C==
The line below this paragraph, containing "STRUCTURE_2vu7", creates the "Structure Box" on the page.
<StructureSection load='2vu7' size='340' side='right'caption='[[2vu7]], [[Resolution|resolution]] 1.08&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vu7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VU7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.08&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
{{STRUCTURE_2vu7|  PDB=2vu7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vu7 OCA], [https://pdbe.org/2vu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vu7 RCSB], [https://www.ebi.ac.uk/pdbsum/2vu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vu7 ProSAT]</span></td></tr>
 
</table>
===ATOMIC RESOLUTION (1.08 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 4 C===
== Function ==
 
[https://www.uniprot.org/uniprot/THM1_THADA THM1_THADA] Taste-modifying protein; intensely sweet-tasting. It is 100000 times sweeter than sucrose on a molar basis.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2VU7 is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VU7 OCA].  
Check<jmol>
[[Category: Asherie, N.]]
  <jmolCheckbox>
[[Category: Ginsberg, C.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vu/2vu7_consurf.spt"</scriptWhenChecked>
[[Category: Jakoncic, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Chirality]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Crystallization]]
  </jmolCheckbox>
[[Category: Cytoplasmic vesicle]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vu7 ConSurf].
[[Category: Dl-tartaric acid]]
<div style="clear:both"></div>
[[Category: Kinetics of crystallization]]
__TOC__
[[Category: Microbatch]]
</StructureSection>
[[Category: Plant protein]]
[[Category: Large Structures]]
[[Category: Purified protein]]
[[Category: Thaumatococcus daniellii]]
[[Category: Sweet protein]]
[[Category: Asherie N]]
[[Category: Taste-modifying protein]]
[[Category: Ginsberg C]]
[[Category: Temperature]]
[[Category: Jakoncic J]]
[[Category: Thaumatin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 15 13:45:29 2009''

Latest revision as of 12:33, 6 November 2024

Atomic resolution (1.08 A) structure of purified thaumatin I grown in sodium meso-tartrate at 4 CAtomic resolution (1.08 A) structure of purified thaumatin I grown in sodium meso-tartrate at 4 C

Structural highlights

2vu7 is a 1 chain structure with sequence from Thaumatococcus daniellii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.08Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

THM1_THADA Taste-modifying protein; intensely sweet-tasting. It is 100000 times sweeter than sucrose on a molar basis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2vu7, resolution 1.08Å

Drag the structure with the mouse to rotate

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OCA
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