2k2n: Difference between revisions
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==Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state== | ==Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state== | ||
<StructureSection load='2k2n' size='340' side='right' caption='[[2k2n | <StructureSection load='2k2n' size='340' side='right'caption='[[2k2n]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2k2n]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2k2n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_sp._RCC307 Synechococcus sp. RCC307]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K2N FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr> | ||
<tr><td class="sblockLbl"><b> | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k2n OCA], [https://pdbe.org/2k2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k2n RCSB], [https://www.ebi.ac.uk/pdbsum/2k2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k2n ProSAT], [https://www.topsan.org/Proteins/CESG/2k2n TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/2k2n_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/2k2n_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k2n ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 2k2n" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Synechococcus sp.]] | [[Category: Synechococcus sp. RCC307]] | ||
[[Category: Cornilescu | [[Category: Cornilescu CC]] | ||
[[Category: Cornilescu | [[Category: Cornilescu G]] | ||
[[Category: Markley | [[Category: Markley JL]] | ||
[[Category: Ulijasz | [[Category: Ulijasz AT]] | ||
[[Category: Vierstra | [[Category: Vierstra RD]] | ||