2yvh: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Crystal structure of the operator-binding form of the multi-drug binding transcriptional repressor CgmR==
-<StructureSection load='2yvh' size='340' side='right' caption='[[2yvh]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+<StructureSection load='2yvh' size='340' side='right'caption='[[2yvh]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2yvh]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YVH FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2yvh]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YVH FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2zoy|2zoy]], [[2zoz|2zoz]], [[2yve|2yve]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yvh OCA], [http://pdbe.org/2yvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yvh RCSB], [http://www.ebi.ac.uk/pdbsum/2yvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yvh ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yvh OCA], [https://pdbe.org/2yvh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yvh RCSB], [https://www.ebi.ac.uk/pdbsum/2yvh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yvh ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8NMG3_CORGL Q8NMG3_CORGL]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yvh_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yvh_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 27: / Line 29: @@
 </div>
 <div class="pdbe-citations 2yvh" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Itou, H]]
+[[Category: Corynebacterium glutamicum ATCC 13032]]
-[[Category: Shirakihara, Y]]
+[[Category: Large Structures]]
-[[Category: Tanaka, I]]
+[[Category: Itou H]]
-[[Category: Helix-turn-helix]]
+[[Category: Shirakihara Y]]
-[[Category: Protein-dna complex]]
+[[Category: Tanaka I]]
-[[Category: Tetr-family]]
-[[Category: Transcription-dna complex]]