3clm: Difference between revisions

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-{{Seed}}
-[[Image:3clm.png|left|200px]]
-<!--
+==Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at 1.14 A resolution==
-The line below this paragraph, containing "STRUCTURE_3clm", creates the "Structure Box" on the page.
+<StructureSection load='3clm' size='340' side='right'caption='[[3clm]], [[Resolution|resolution]] 1.14&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3clm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_FA_1090 Neisseria gonorrhoeae FA 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLM FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.14&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_3clm|  PDB=3clm  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clm OCA], [https://pdbe.org/3clm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clm RCSB], [https://www.ebi.ac.uk/pdbsum/3clm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clm ProSAT], [https://www.topsan.org/Proteins/JCSG/3clm TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TAL_NEIG1 TAL_NEIG1] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clm_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clm ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at 1.14 A resolution===
+==See Also==
+*[[Transaldolase 3D structures|Transaldolase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-CLM is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLM OCA].
+[[Category: Large Structures]]
-[[Category: Neisseria gonorrhoeae fa 1090]]
+[[Category: Neisseria gonorrhoeae FA 1090]]
-[[Category: Transaldolase]]
-[[Category: JCSG, Joint Center for Structural Genomics.]]
-[[Category: Cytoplasm]]
-[[Category: Jcsg]]
-[[Category: Joint center for structural genomic]]
-[[Category: Lyase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
-[[Category: Transaldolase]]
-[[Category: Transferase]]
-[[Category: Yp_208650 1]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:56:40 2008''