2yqu: Difference between revisions

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<StructureSection load='2yqu' size='340' side='right'caption='[[2yqu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='2yqu' size='340' side='right'caption='[[2yqu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2yqu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YQU FirstGlance]. <br>
<table><tr><td colspan='2'>[[2yqu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YQU FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydrolipoyl_dehydrogenase Dihydrolipoyl dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.4 1.8.1.4] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yqu OCA], [http://pdbe.org/2yqu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yqu RCSB], [http://www.ebi.ac.uk/pdbsum/2yqu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yqu ProSAT], [http://www.topsan.org/Proteins/RSGI/2yqu TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yqu OCA], [https://pdbe.org/2yqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yqu RCSB], [https://www.ebi.ac.uk/pdbsum/2yqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yqu ProSAT], [https://www.topsan.org/Proteins/RSGI/2yqu TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SLK6_THET8 Q5SLK6_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/2yqu_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/2yqu_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Dihydrolipoyl dehydrogenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Thet8]]
[[Category: Thermus thermophilus HB8]]
[[Category: Adachi, W]]
[[Category: Adachi W]]
[[Category: Hossain, M T]]
[[Category: Hossain MT]]
[[Category: Kamiya, N]]
[[Category: Kamiya N]]
[[Category: Kondo, H]]
[[Category: Kondo H]]
[[Category: Kuramitsu, K]]
[[Category: Kuramitsu K]]
[[Category: Nakai, T]]
[[Category: Nakai T]]
[[Category: 2-oxoglutarate dehydrogenase complex]]
[[Category: Lipoamide dehydrogenase]]
[[Category: Oxidoreductase]]
[[Category: Pyruvate dehydrogenase complex]]

Latest revision as of 11:07, 23 October 2024

Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilusCrystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus

Structural highlights

2yqu is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SLK6_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yqu, resolution 1.70Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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