2yqu: Difference between revisions

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-[[Image:2yqu.png|left|200px]]
-{{STRUCTURE_2yqu|  PDB=2yqu  |  SCENE=  }}
+==Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus==
+<StructureSection load='2yqu' size='340' side='right'caption='[[2yqu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-===Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2yqu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YQU FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-[[2yqu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQU OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yqu OCA], [https://pdbe.org/2yqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yqu RCSB], [https://www.ebi.ac.uk/pdbsum/2yqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yqu ProSAT], [https://www.topsan.org/Proteins/RSGI/2yqu TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q5SLK6_THET8 Q5SLK6_THET8]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/2yqu_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yqu ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
-*[[2-Oxoglutarate Dehydrogenase|2-Oxoglutarate Dehydrogenase]]
+__TOC__
-[[Category: Dihydrolipoyl dehydrogenase]]
+</StructureSection>
-[[Category: Thermus thermophilus hb8]]
+[[Category: Large Structures]]
-[[Category: Adachi, W.]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: Hossain, M T.]]
+[[Category: Adachi W]]
-[[Category: Kamiya, N.]]
+[[Category: Hossain MT]]
-[[Category: Kondo, H.]]
+[[Category: Kamiya N]]
-[[Category: Kuramitsu, K.]]
+[[Category: Kondo H]]
-[[Category: Nakai, T.]]
+[[Category: Kuramitsu K]]
-[[Category: 2-oxoglutarate dehydrogenase complex]]
+[[Category: Nakai T]]
-[[Category: Lipoamide dehydrogenase]]
-[[Category: Oxidoreductase]]
-[[Category: Pyruvate dehydrogenase complex]]