2eq9: Difference between revisions

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{{Seed}}
[[Image:2eq9.png|left|200px]]


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==Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdb==
The line below this paragraph, containing "STRUCTURE_2eq9", creates the "Structure Box" on the page.
<StructureSection load='2eq9' size='340' side='right'caption='[[2eq9]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2eq9]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQ9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
{{STRUCTURE_2eq9|  PDB=2eq9 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eq9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq9 OCA], [https://pdbe.org/2eq9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eq9 RCSB], [https://www.ebi.ac.uk/pdbsum/2eq9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eq9 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SLR0_THET8 Q5SLR0_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eq9 ConSurf].
<div style="clear:both"></div>


===Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdb===
==See Also==
 
*[[Dihydrolipoamide acetyltransferase 3D structures|Dihydrolipoamide acetyltransferase 3D structures]]
 
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
==About this Structure==
__TOC__
2EQ9 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ9 OCA].
</StructureSection>
[[Category: Dihydrolipoyl dehydrogenase]]
[[Category: Large Structures]]
[[Category: Protein complex]]
[[Category: Thermus thermophilus HB8]]
[[Category: Thermus thermophilus]]
[[Category: Kamiya N]]
[[Category: Kamiya, N.]]
[[Category: Nakai T]]
[[Category: Nakai, T.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Oxidoreductase]]
[[Category: Protein-protein complex]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 20:43:38 2008''

Latest revision as of 10:57, 30 October 2024

Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdbCrystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdb

Structural highlights

2eq9 is a 12 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.09Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SLR0_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2eq9, resolution 2.09Å

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