3cjm: Difference between revisions

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New page: left|200px {{Structure |PDB= 3cjm |SIZE=350|CAPTION= <scene name='initialview01'>3cjm</scene>, resolution 1.500Å |SITE= <scene name='pdbsite=AC1:No3+Binding+Site...
 
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[[Image:3cjm.jpg|left|200px]]


{{Structure
==Crystal structure of putative beta-lactamase (NP_815223.1) from Enterococcus faecalis V583 at 1.50 A resolution==
|PDB= 3cjm |SIZE=350|CAPTION= <scene name='initialview01'>3cjm</scene>, resolution 1.500&Aring;
<StructureSection load='3cjm' size='340' side='right'caption='[[3cjm]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:No3+Binding+Site+For+Residue+A+1'>AC1</scene>, <scene name='pdbsite=AC2:No3+Binding+Site+For+Residue+A+2'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+3'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+4'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+5'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+6'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+7'>AC7</scene> and <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+8'>AC8</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>
<table><tr><td colspan='2'>[[3cjm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJM FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
|GENE= NP_815223.1, EF_1502 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 Enterococcus faecalis V583])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2367 PenP]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjm OCA], [https://pdbe.org/3cjm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjm RCSB], [https://www.ebi.ac.uk/pdbsum/3cjm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjm ProSAT], [https://www.topsan.org/Proteins/JCSG/3cjm TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cjm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjm OCA], [http://www.ebi.ac.uk/pdbsum/3cjm PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=3cjm RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q834X5_ENTFA Q834X5_ENTFA]
'''Crystal structure of putative beta-lactamase (NP_815223.1) from Enterococcus faecalis V583 at 1.50 A resolution'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3CJM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJM OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjm_consurf.spt"</scriptWhenChecked>
[[Category: Enterococcus faecalis v583]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: JCSG, Joint Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: hydrolase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjm ConSurf].
[[Category: jcsg]]
<div style="clear:both"></div>
[[Category: joint center for structural genomic]]
__TOC__
[[Category: np_815223 1]]
</StructureSection>
[[Category: protein structure initiative]]
[[Category: Enterococcus faecalis V583]]
[[Category: psi-2]]
[[Category: Large Structures]]
[[Category: putative beta-lactamase]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 10:00:21 2008''

Latest revision as of 11:54, 30 October 2024

Crystal structure of putative beta-lactamase (NP_815223.1) from Enterococcus faecalis V583 at 1.50 A resolutionCrystal structure of putative beta-lactamase (NP_815223.1) from Enterococcus faecalis V583 at 1.50 A resolution

Structural highlights

3cjm is a 1 chain structure with sequence from Enterococcus faecalis V583. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q834X5_ENTFA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cjm, resolution 1.50Å

Drag the structure with the mouse to rotate

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