2vml: Difference between revisions

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-==THE MONOCLINIC STRUCTURE OF PHYCOCYANIN FROM GLOEOBACTER VIOLACEUS==
-<StructureSection load='2vml' size='340' side='right' caption='[[2vml]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+==The monoclinic structure of phycocyanin from Gloeobacter violaceus==
+<StructureSection load='2vml' size='340' side='right'caption='[[2vml]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2vml]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA]. <br>
+<table><tr><td colspan='2'>[[2vml]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VML FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vjr|2vjr]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vml OCA], [https://pdbe.org/2vml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vml RCSB], [https://www.ebi.ac.uk/pdbsum/2vml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vml ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vml OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vml RCSB], [http://www.ebi.ac.uk/pdbsum/2vml PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7M7F7_GLOVI Q7M7F7_GLOVI]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/2vml_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/2vml_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vml ConSurf].
 <div style="clear:both"></div>
-== References ==
-<references/>
+==See Also==
+*[[Phycocyanin|Phycocyanin]]
 __TOC__
 </StructureSection>
 [[Category: Gloeobacter violaceus]]
-[[Category: Barber, J.]]
+[[Category: Large Structures]]
-[[Category: Benson, S.]]
+[[Category: Barber J]]
-[[Category: Murray, J W.]]
+[[Category: Benson S]]
-[[Category: Bile pigment]]
+[[Category: Murray JW]]
-[[Category: Chromophore]]
-[[Category: Electron transport]]
-[[Category: Light-harvesting]]
-[[Category: Photosynthesis]]
-[[Category: Phycobilisome]]
-[[Category: Transport]]