2vml: Difference between revisions

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[[Image:2vml.png|left|200px]]


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==The monoclinic structure of phycocyanin from Gloeobacter violaceus==
The line below this paragraph, containing "STRUCTURE_2vml", creates the "Structure Box" on the page.
<StructureSection load='2vml' size='340' side='right'caption='[[2vml]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vml]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VML FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
{{STRUCTURE_2vml|  PDB=2vml |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vml OCA], [https://pdbe.org/2vml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vml RCSB], [https://www.ebi.ac.uk/pdbsum/2vml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vml ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q7M7F7_GLOVI Q7M7F7_GLOVI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/2vml_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vml ConSurf].
<div style="clear:both"></div>


===THE MONOCLINIC STRUCTURE OF PHYCOCYANIN FROM GLOEOBACTER VIOLACEUS===
==See Also==
 
*[[Phycocyanin|Phycocyanin]]
 
__TOC__
==About this Structure==
</StructureSection>
[[2vml]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA].
[[Category: Gloeobacter violaceus]]
[[Category: Gloeobacter violaceus]]
[[Category: Barber, J.]]
[[Category: Large Structures]]
[[Category: Benson, S.]]
[[Category: Barber J]]
[[Category: Murray, J W.]]
[[Category: Benson S]]
[[Category: Bile pigment]]
[[Category: Murray JW]]
[[Category: Chromophore]]
[[Category: Electron transport]]
[[Category: Light-harvesting]]
[[Category: Photosynthesis]]
[[Category: Phycobilisome]]
[[Category: Transport]]

Latest revision as of 12:32, 6 November 2024

The monoclinic structure of phycocyanin from Gloeobacter violaceusThe monoclinic structure of phycocyanin from Gloeobacter violaceus

Structural highlights

2vml is a 12 chain structure with sequence from Gloeobacter violaceus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q7M7F7_GLOVI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2vml, resolution 2.40Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA