3cbw: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3cbw.png|left|200px]]


<!--
==Crystal structure of the YdhT protein from Bacillus subtilis==
The line below this paragraph, containing "STRUCTURE_3cbw", creates the "Structure Box" on the page.
<StructureSection load='3cbw' size='340' side='right'caption='[[3cbw]], [[Resolution|resolution]] 1.27&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CBW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.269&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
{{STRUCTURE_3cbw|  PDB=3cbw  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cbw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cbw OCA], [https://pdbe.org/3cbw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cbw RCSB], [https://www.ebi.ac.uk/pdbsum/3cbw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cbw ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cbw TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the YdhT protein from Bacillus subtilis===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3CBW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBW OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/3cbw_consurf.spt"</scriptWhenChecked>
[[Category: Bacillus subtilis]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Almo, S C.]]
  </jmolCheckbox>
[[Category: Bain, K T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cbw ConSurf].
[[Category: Bonanno, J B.]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: Iizuka, M.]]
</StructureSection>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Large Structures]]
[[Category: Romero, R.]]
[[Category: Almo SC]]
[[Category: Rutter, M.]]
[[Category: Bain KT]]
[[Category: Sauder, J M.]]
[[Category: Bonanno JB]]
[[Category: Smith, D.]]
[[Category: Burley SK]]
[[Category: Wasserman, S.]]
[[Category: Iizuka M]]
[[Category: New york structural genomix research consortium]]
[[Category: Romero R]]
[[Category: Nysgxrc]]
[[Category: Rutter M]]
[[Category: Protein structure initiative]]
[[Category: Sauder JM]]
[[Category: Psi-2]]
[[Category: Smith D]]
[[Category: Structural genomic]]
[[Category: Wasserman S]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:08:06 2008''

Latest revision as of 11:53, 30 October 2024

Crystal structure of the YdhT protein from Bacillus subtilisCrystal structure of the YdhT protein from Bacillus subtilis

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.269Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cbw, resolution 1.27Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3cbw&oldid=4204899"