2owt: Difference between revisions

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 ==Crystal structure of Bordetella pertussis holo ferric binding protein with bound synergistic carbonate anion==
-<StructureSection load='2owt' size='340' side='right' caption='[[2owt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='2owt' size='340' side='right'caption='[[2owt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2owt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis_tohama_i Bordetella pertussis tohama i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OWT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OWT FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2owt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis_Tohama_I Bordetella pertussis Tohama I]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OWT FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1y9u|1y9u]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bFbpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257313 Bordetella pertussis Tohama I])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2owt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2owt OCA], [https://pdbe.org/2owt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2owt RCSB], [https://www.ebi.ac.uk/pdbsum/2owt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2owt ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2owt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2owt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2owt RCSB], [http://www.ebi.ac.uk/pdbsum/2owt PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7VXW9_BORPE Q7VXW9_BORPE]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ow/2owt_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ow/2owt_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2owt ConSurf].
 <div style="clear:both"></div>
+==See Also==
+*[[Ferric-binding protein|Ferric-binding protein]]
 __TOC__
 </StructureSection>
-[[Category: Bordetella pertussis tohama i]]
+[[Category: Bordetella pertussis Tohama I]]
-[[Category: Murphy, M E.P.]]
+[[Category: Large Structures]]
-[[Category: Tom-Yew, S A.L.]]
+[[Category: Murphy MEP]]
-[[Category: Alpha-beta-alpha unit]]
+[[Category: Tom-Yew SAL]]
-[[Category: Anti-parallel beta-strands hinge region]]
-[[Category: Metal binding protein]]