3brc: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3brc.jpg|left|200px]]


{{Structure
==Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum==
|PDB= 3brc |SIZE=350|CAPTION= <scene name='initialview01'>3brc</scene>, resolution 1.60&Aring;
<StructureSection load='3brc' size='340' side='right'caption='[[3brc]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Residue+A+157'>AC1</scene>, <scene name='pdbsite=AC2:Po4+Binding+Site+For+Residue+A+158'>AC2</scene> and <scene name='pdbsite=AC3:Po4+Binding+Site+For+Residue+B+157'>AC3</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
<table><tr><td colspan='2'>[[3brc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BRC FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE= MTH1144, GI:2622249 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=187420 Methanothermobacter thermautotrophicus str. Delta H])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3brc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3brc OCA], [https://pdbe.org/3brc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3brc RCSB], [https://www.ebi.ac.uk/pdbsum/3brc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3brc ProSAT], [https://www.topsan.org/Proteins/MCSG/3brc TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3brc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3brc OCA], [http://www.ebi.ac.uk/pdbsum/3brc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3brc RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/O27213_METTH O27213_METTH]
 
== Evolutionary Conservation ==
'''Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3brc_consurf.spt"</scriptWhenChecked>
3BRC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._delta_h Methanothermobacter thermautotrophicus str. delta h]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRC OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Methanothermobacter thermautotrophicus str. delta h]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Edwards, A M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3brc ConSurf].
[[Category: Evdokimova, E.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: Kudritska, M.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Savchenko, A.]]
[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
[[Category: Zhang, R.]]
[[Category: Edwards AM]]
[[Category: conserved protein]]
[[Category: Evdokimova E]]
[[Category: mcsg]]
[[Category: Joachimiak A]]
[[Category: methanobacterium thermoautotrophicum]]
[[Category: Kudritska M]]
[[Category: midwest center for structural genomic]]
[[Category: Savchenko A]]
[[Category: protein structure initiative]]
[[Category: Zhang R]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:28:31 2008''

Latest revision as of 04:38, 21 November 2024

Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicumCrystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum

Structural highlights

3brc is a 2 chain structure with sequence from Methanothermobacter thermautotrophicus str. Delta H. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O27213_METTH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3brc, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3brc&oldid=4204806"