3c6v: Difference between revisions

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[[Image:3c6v.jpg|left|200px]]<br /><applet load="3c6v" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c6v, resolution 1.90&Aring;" />
'''Crystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatus'''<br />


==About this Structure==
==Crystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatus==
3C6V is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aspergillus_fumigatus_af293 Aspergillus fumigatus af293] with <scene name='pdbligand=NA:'>NA</scene>, <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Na+Binding+Site+For+Residue+B+141'>AC1</scene> and <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+B+142'>AC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6V OCA].
<StructureSection load='3c6v' size='340' side='right'caption='[[3c6v]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Aspergillus fumigatus af293]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3c6v]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_fumigatus_Af293 Aspergillus fumigatus Af293]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C6V FirstGlance]. <br>
[[Category: Binkowski, T A.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Edwards, A M.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6v OCA], [https://pdbe.org/3c6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c6v RCSB], [https://www.ebi.ac.uk/pdbsum/3c6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6v ProSAT], [https://www.topsan.org/Proteins/MCSG/3c6v TOPSAN]</span></td></tr>
[[Category: Kagan, O.]]
</table>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
== Function ==
[[Category: Savchenko, A.]]
[https://www.uniprot.org/uniprot/Q4WF74_ASPFU Q4WF74_ASPFU]  
[[Category: Singer, A U.]]
== Evolutionary Conservation ==
[[Category: Skarina, T.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: CL]]
Check<jmol>
[[Category: NA]]
  <jmolCheckbox>
[[Category: SO4]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/3c6v_consurf.spt"</scriptWhenChecked>
[[Category: aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: mcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: midwest center for structural genomics]]
  </jmolCheckbox>
[[Category: protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c6v ConSurf].
[[Category: psi-2]]
<div style="clear:both"></div>
[[Category: structural genomics]]
__TOC__
[[Category: unknown function]]
</StructureSection>
 
[[Category: Aspergillus fumigatus Af293]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:33:56 2008''
[[Category: Large Structures]]
[[Category: Binkowski TA]]
[[Category: Edwards AM]]
[[Category: Joachimiak A]]
[[Category: Kagan O]]
[[Category: Savchenko A]]
[[Category: Singer AU]]
[[Category: Skarina T]]

Latest revision as of 11:52, 30 October 2024

Crystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatusCrystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatus

Structural highlights

3c6v is a 3 chain structure with sequence from Aspergillus fumigatus Af293. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q4WF74_ASPFU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c6v, resolution 1.90Å

Drag the structure with the mouse to rotate

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