3bv8: Difference between revisions

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[[Image:3bv8.png|left|200px]]


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==Crystal structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureus==
The line below this paragraph, containing "STRUCTURE_3bv8", creates the "Structure Box" on the page.
<StructureSection load='3bv8' size='340' side='right'caption='[[3bv8]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bv8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu50 Staphylococcus aureus subsp. aureus Mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BV8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BV8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3bv8|  PDB=3bv8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bv8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bv8 OCA], [https://pdbe.org/3bv8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bv8 RCSB], [https://www.ebi.ac.uk/pdbsum/3bv8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bv8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3bv8 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureus===
== Function ==
 
[https://www.uniprot.org/uniprot/DAPH_STAAM DAPH_STAAM] Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.[HAMAP-Rule:MF_01691]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3BV8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_mu50 Staphylococcus aureus subsp. aureus mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BV8 OCA].  
Check<jmol>
[[Category: Staphylococcus aureus subsp. aureus mu50]]
  <jmolCheckbox>
[[Category: Clancy, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/3bv8_consurf.spt"</scriptWhenChecked>
[[Category: Cuff, M E.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Duggan, E.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bv8 ConSurf].
[[Category: Acetyltransferase]]
<div style="clear:both"></div>
[[Category: Mcsg]]
__TOC__
[[Category: Midwest center for structural genomic]]
</StructureSection>
[[Category: Pfam08503]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Staphylococcus aureus subsp. aureus Mu50]]
[[Category: Psi-2]]
[[Category: Clancy S]]
[[Category: Structural genomic]]
[[Category: Cuff ME]]
 
[[Category: Duggan E]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:40:26 2008''
[[Category: Joachimiak A]]

Latest revision as of 11:50, 30 October 2024

Crystal structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureusCrystal structure of the N-terminal domain of tetrahydrodipicolinate acetyltransferase from Staphylococcus aureus

Structural highlights

3bv8 is a 1 chain structure with sequence from Staphylococcus aureus subsp. aureus Mu50. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

DAPH_STAAM Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.[HAMAP-Rule:MF_01691]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3bv8, resolution 1.75Å

Drag the structure with the mouse to rotate

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OCA
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