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[[Image:3bnm.jpg|left|200px]]


{{Structure
==Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine==
|PDB= 3bnm |SIZE=350|CAPTION= <scene name='initialview01'>3bnm</scene>, resolution 2.200&Aring;
<StructureSection load='3bnm' size='340' side='right'caption='[[3bnm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Fad+Binding+Site+For+Residue+B+802'>AC1</scene>, <scene name='pdbsite=AC2:Fad+Binding+Site+For+Residue+A+801'>AC2</scene>, <scene name='pdbsite=AC3:Spj+Binding+Site+For+Residue+A+802'>AC3</scene> and <scene name='pdbsite=AC4:Spj+Binding+Site+For+Residue+B+803'>AC4</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SPJ:(3R,3&#39;R)-N~1~,N~1~&#39;-BUTANE-1,4-DIYLDIBUTANE-1,3-DIAMINE'>SPJ</scene>
<table><tr><td colspan='2'>[[3bnm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BNM FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Polyamine_oxidase Polyamine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.3.11 1.5.3.11] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
|GENE= FMS1, YMR020W, YM9711.09 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SPJ:(3R,3R)-N~1~,N~1~-BUTANE-1,4-DIYLDIBUTANE-1,3-DIAMINE'>SPJ</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bnm OCA], [https://pdbe.org/3bnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bnm RCSB], [https://www.ebi.ac.uk/pdbsum/3bnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bnm ProSAT]</span></td></tr>
|RELATEDENTRY=[[3bnu|3BNU]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bnm OCA], [http://www.ebi.ac.uk/pdbsum/3bnm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bnm RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bn/3bnm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bnm ConSurf].
<div style="clear:both"></div>


'''Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine'''
==See Also==
 
*[[Polyamine oxidase|Polyamine oxidase]]
 
__TOC__
==About this Structure==
</StructureSection>
3BNM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNM OCA].
[[Category: Large Structures]]
[[Category: Polyamine oxidase]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Hao Q]]
[[Category: Hao, Q.]]
[[Category: Huang Q]]
[[Category: Huang, Q.]]
[[Category: crystal structure]]
[[Category: fad]]
[[Category: flavoprotein]]
[[Category: fms1]]
[[Category: oxidoreductase]]
[[Category: polyamine oxidase]]
[[Category: stereospecificity]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:27:43 2008''

Latest revision as of 04:38, 21 November 2024

Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermineCrystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine

Structural highlights

3bnm is a 2 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3bnm, resolution 2.20Å

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