2o0y: Difference between revisions

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[[Image:2o0y.jpg|left|200px]]


{{Structure
==Crystal structure of putative transcriptional regulator RHA1_ro06953 (IclR-family) from Rhodococcus sp.==
|PDB= 2o0y |SIZE=350|CAPTION= <scene name='initialview01'>2o0y</scene>, resolution 2.00&Aring;
<StructureSection load='2o0y' size='340' side='right'caption='[[2o0y]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2o0y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O0Y FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
|GENE= RHA00472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1831 Rhodococcus sp.])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09339 HTH_IclR], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01614 IclR], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1414 IclR]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o0y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0y OCA], [https://pdbe.org/2o0y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o0y RCSB], [https://www.ebi.ac.uk/pdbsum/2o0y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o0y ProSAT], [https://www.topsan.org/Proteins/MCSG/2o0y TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o0y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0y OCA], [http://www.ebi.ac.uk/pdbsum/2o0y PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2o0y RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q0S167_RHOJR Q0S167_RHOJR]
'''Crystal structure of putative transcriptional regulator RHA1_ro06953 (IclR-family) from Rhodococcus sp.'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2O0Y is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0Y OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/2o0y_consurf.spt"</scriptWhenChecked>
[[Category: Rhodococcus sp.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chruszcz, M.]]
  </jmolCheckbox>
[[Category: Cymborowski, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o0y ConSurf].
[[Category: Edwards, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Minor, W.]]
</StructureSection>
[[Category: Onopriyenko, O.]]
[[Category: Large Structures]]
[[Category: Savchenko, A.]]
[[Category: Rhodococcus sp]]
[[Category: Skarina, T.]]
[[Category: Chruszcz M]]
[[Category: Wang, S.]]
[[Category: Cymborowski M]]
[[Category: iclr-family]]
[[Category: Edwards A]]
[[Category: mcsg]]
[[Category: Joachimiak A]]
[[Category: midwest center for structural genomic]]
[[Category: Minor W]]
[[Category: protein structure initiative]]
[[Category: Onopriyenko O]]
[[Category: psi-2]]
[[Category: Savchenko A]]
[[Category: structural genomic]]
[[Category: Skarina T]]
[[Category: transcriptional regulator]]
[[Category: Wang S]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:35:28 2008''

Latest revision as of 11:22, 30 October 2024

Crystal structure of putative transcriptional regulator RHA1_ro06953 (IclR-family) from Rhodococcus sp.Crystal structure of putative transcriptional regulator RHA1_ro06953 (IclR-family) from Rhodococcus sp.

Structural highlights

2o0y is a 4 chain structure with sequence from Rhodococcus sp.. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q0S167_RHOJR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2o0y, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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