2nqw: Difference between revisions

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[[Image:2nqw.png|left|200px]]


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==Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis==
The line below this paragraph, containing "STRUCTURE_2nqw", creates the "Structure Box" on the page.
<StructureSection load='2nqw' size='340' side='right'caption='[[2nqw]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2nqw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NQW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2nqw|  PDB=2nqw  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nqw OCA], [https://pdbe.org/2nqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nqw RCSB], [https://www.ebi.ac.uk/pdbsum/2nqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nqw ProSAT], [https://www.topsan.org/Proteins/MCSG/2nqw TOPSAN]</span></td></tr>
 
</table>
===Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7MXD1_PORGI Q7MXD1_PORGI]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2NQW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQW OCA].  
Check<jmol>
[[Category: Porphyromonas gingivalis]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/2nqw_consurf.spt"</scriptWhenChecked>
[[Category: Abdullah, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Cuff, M E.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nqw ConSurf].
[[Category: Volkart, L.]]
<div style="clear:both"></div>
[[Category: Cbs domain]]
__TOC__
[[Category: Corc_hlyc]]
</StructureSection>
[[Category: Hemolysin]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Porphyromonas gingivalis W83]]
[[Category: Midwest center for structural genomic]]
[[Category: Abdullah J]]
[[Category: Pfam03471]]
[[Category: Cuff ME]]
[[Category: Protein structure initiative]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Volkart L]]
[[Category: Structural genomic]]
[[Category: Transporter associated domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 04:03:49 2008''

Latest revision as of 04:14, 21 November 2024

Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalisStructure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis

Structural highlights

2nqw is a 1 chain structure with sequence from Porphyromonas gingivalis W83. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q7MXD1_PORGI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2nqw, resolution 1.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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