2nqw: Difference between revisions

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New page: left|200px<br /><applet load="2nqw" size="350" color="white" frame="true" align="right" spinBox="true" caption="2nqw, resolution 1.30Å" /> '''Structure of the tra...
 
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[[Image:2nqw.gif|left|200px]]<br /><applet load="2nqw" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2nqw, resolution 1.30&Aring;" />
'''Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis'''<br />


==About this Structure==
==Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis==
2NQW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQW OCA].
<StructureSection load='2nqw' size='340' side='right'caption='[[2nqw]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
[[Category: Porphyromonas gingivalis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2nqw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NQW FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
[[Category: Cuff, M.E.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nqw OCA], [https://pdbe.org/2nqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nqw RCSB], [https://www.ebi.ac.uk/pdbsum/2nqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nqw ProSAT], [https://www.topsan.org/Proteins/MCSG/2nqw TOPSAN]</span></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
</table>
[[Category: Volkart, L.]]
== Function ==
[[Category: GOL]]
[https://www.uniprot.org/uniprot/Q7MXD1_PORGI Q7MXD1_PORGI]  
[[Category: cbs domains]]
== Evolutionary Conservation ==
[[Category: corc_hlyc]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: hemolysins]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: midwest center for structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/2nqw_consurf.spt"</scriptWhenChecked>
[[Category: pfam03471]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi-2]]
  </jmolCheckbox>
[[Category: structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nqw ConSurf].
[[Category: transporter associated domain]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:58:13 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Porphyromonas gingivalis W83]]
[[Category: Abdullah J]]
[[Category: Cuff ME]]
[[Category: Joachimiak A]]
[[Category: Volkart L]]

Latest revision as of 04:14, 21 November 2024

Structure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalisStructure of the transporter associated domain from PG_0272, a CBS domain protein from Porphyromonas gingivalis

Structural highlights

2nqw is a 1 chain structure with sequence from Porphyromonas gingivalis W83. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q7MXD1_PORGI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2nqw, resolution 1.30Å

Drag the structure with the mouse to rotate

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OCA