2iqq: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2iqq.gif|left|200px]]<br /><applet load="2iqq" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2iqq, resolution 2.66&Aring;" />
-'''The Crystal Structure of Iron, Sulfur-Dependent L-serine dehydratase from Legionella pneumophila subsp. pneumophila'''<br />
-==About this Structure==
+==The Crystal Structure of Iron, Sulfur-Dependent L-serine dehydratase from Legionella pneumophila subsp. pneumophila==
-IQQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila Legionella pneumophila subsp. pneumophila] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/L-serine_ammonia-lyase L-serine ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.17 4.3.1.17] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IQQ OCA].
+<StructureSection load='2iqq' size='340' side='right'caption='[[2iqq]], [[Resolution|resolution]] 2.66&Aring;' scene=''>
-[[Category: L-serine ammonia-lyase]]
+== Structural highlights ==
-[[Category: Legionella pneumophila subsp. pneumophila]]
+<table><tr><td colspan='2'>[[2iqq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IQQ FirstGlance]. <br>
-[[Category: Single protein]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.66&#8491;</td></tr>
-[[Category: Hatzos, C.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Joachimiak, A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iqq OCA], [https://pdbe.org/2iqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iqq RCSB], [https://www.ebi.ac.uk/pdbsum/2iqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iqq ProSAT], [https://www.topsan.org/Proteins/MCSG/2iqq TOPSAN]</span></td></tr>
-[[Category: Kim, Y.]]
+</table>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+== Evolutionary Conservation ==
-[[Category: Moy, S.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: MG]]
+Check<jmol>
-[[Category: alpha-beta]]
+  <jmolCheckbox>
-[[Category: mcsg]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iq/2iqq_consurf.spt"</scriptWhenChecked>
-[[Category: midwest center for structural genomics]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: protein structure initiative]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: psi-2]]
+  </jmolCheckbox>
-[[Category: structural genomics]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iqq ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:45:20 2008''
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]]
+[[Category: Hatzos C]]
+[[Category: Joachimiak A]]
+[[Category: Kim Y]]
+[[Category: Moy S]]