2i3d: Difference between revisions

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[[Image:2i3d.gif|left|200px]]


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==Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens==
The line below this paragraph, containing "STRUCTURE_2i3d", creates the "Structure Box" on the page.
<StructureSection load='2i3d' size='340' side='right'caption='[[2i3d]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2i3d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2i3d|  PDB=2i3d  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3d OCA], [https://pdbe.org/2i3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3d RCSB], [https://www.ebi.ac.uk/pdbsum/2i3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3d ProSAT], [https://www.topsan.org/Proteins/MCSG/2i3d TOPSAN]</span></td></tr>
 
</table>
'''Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens'''
== Function ==
 
[https://www.uniprot.org/uniprot/A9CIK7_AGRFC A9CIK7_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2I3D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3d_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Osipiuk, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3d ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Xu, X.]]
__TOC__
[[Category: Zheng, H.]]
</StructureSection>
[[Category: Apc5865]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Hydrolase]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Edwards A]]
[[Category: Midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: Protein structure initiative]]
[[Category: Osipiuk J]]
[[Category: Psi-2]]
[[Category: Savchenko A]]
[[Category: Structural genomic]]
[[Category: Xu X]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 07:01:15 2008''
[[Category: Zheng H]]

Latest revision as of 11:10, 30 October 2024

Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciensCrystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens

Structural highlights

2i3d is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CIK7_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2i3d, resolution 1.50Å

Drag the structure with the mouse to rotate

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OCA
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