2hsj: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2hsj.png|left|200px]]


<!--
==The structure of a putative platelet activating factor from Streptococcus pneumonia.==
The line below this paragraph, containing "STRUCTURE_2hsj", creates the "Structure Box" on the page.
<StructureSection load='2hsj' size='340' side='right'caption='[[2hsj]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2hsj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HSJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2hsj|  PDB=2hsj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hsj OCA], [https://pdbe.org/2hsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hsj RCSB], [https://www.ebi.ac.uk/pdbsum/2hsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hsj ProSAT], [https://www.topsan.org/Proteins/MCSG/2hsj TOPSAN]</span></td></tr>
 
</table>
===The structure of a putative platelet activating factor from Streptococcus pneumonia.===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2HSJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSJ OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hs/2hsj_consurf.spt"</scriptWhenChecked>
[[Category: Streptococcus pneumoniae]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Abdullah, J.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cuff, M E.]]
  </jmolCheckbox>
[[Category: Joachimiak, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hsj ConSurf].
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Mulligan, R.]]
__TOC__
[[Category: Mcsg]]
</StructureSection>
[[Category: Midwest center for structural genomic]]
[[Category: Large Structures]]
[[Category: Platelet activating factor]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Protein structure initiative]]
[[Category: Abdullah J]]
[[Category: Psi-2]]
[[Category: Cuff ME]]
[[Category: Streptococcus pneumonia]]
[[Category: Joachimiak A]]
[[Category: Structral genomic]]
[[Category: Mulligan R]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:46:41 2008''

Latest revision as of 04:02, 21 November 2024

The structure of a putative platelet activating factor from Streptococcus pneumonia.The structure of a putative platelet activating factor from Streptococcus pneumonia.

Structural highlights

2hsj is a 4 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2hsj, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2hsj&oldid=4204471"