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==The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens== | ==The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens== | ||
<StructureSection load='2hmc' size='340' side='right' caption='[[2hmc]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='2hmc' size='340' side='right'caption='[[2hmc]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2hmc]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2hmc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HMC FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hmc OCA], [https://pdbe.org/2hmc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hmc RCSB], [https://www.ebi.ac.uk/pdbsum/2hmc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hmc ProSAT], [https://www.topsan.org/Proteins/MCSG/2hmc TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A9CGZ4_AGRFC A9CGZ4_AGRFC] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/2hmc_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/2hmc_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hmc ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 23: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Agrobacterium | [[Category: Agrobacterium fabrum str. C58]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Joachimiak A]] | ||
[[Category: | [[Category: Kim Y]] | ||
[[Category: Savchenko | [[Category: Savchenko A]] | ||
[[Category: Xu | [[Category: Xu X]] | ||
[[Category: Zhang | [[Category: Zhang R]] | ||
[[Category: Zheng | [[Category: Zheng H]] | ||
Latest revision as of 11:08, 30 October 2024
The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciensThe Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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