2gs8: Difference between revisions

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[[Image:2gs8.gif|left|200px]]


{{Structure
==Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes==
|PDB= 2gs8 |SIZE=350|CAPTION= <scene name='initialview01'>2gs8</scene>, resolution 1.50&Aring;
<StructureSection load='2gs8' size='340' side='right'caption='[[2gs8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2gs8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GS8 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
|GENE= mvaD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160490 Streptococcus pyogenes M1 GAS])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3407 MVD1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam08544 GHMP_kinases_C]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs8 OCA], [https://pdbe.org/2gs8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gs8 RCSB], [https://www.ebi.ac.uk/pdbsum/2gs8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gs8 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gs8 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs8 OCA], [http://www.ebi.ac.uk/pdbsum/2gs8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gs8 RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gs8_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
2GS8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_m1_gas Streptococcus pyogenes m1 gas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS8 OCA].  
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gs8 ConSurf].
[[Category: Streptococcus pyogenes m1 gas]]
<div style="clear:both"></div>
[[Category: Clancy, S.]]
__TOC__
[[Category: Cuff, M E.]]
</StructureSection>
[[Category: Joachimiak, A.]]
[[Category: Large Structures]]
[[Category: Li, H.]]
[[Category: Streptococcus pyogenes M1 GAS]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Clancy S]]
[[Category: mcsg]]
[[Category: Cuff ME]]
[[Category: mevalonate pyrophosphate decarboxylase]]
[[Category: Joachimiak A]]
[[Category: midwest center for structural genomic]]
[[Category: Li H]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: streptococcus pyogene]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:20:47 2008''

Latest revision as of 03:59, 21 November 2024

Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenesStructure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes

Structural highlights

2gs8 is a 1 chain structure with sequence from Streptococcus pyogenes M1 GAS. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gs8, resolution 1.50Å

Drag the structure with the mouse to rotate

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