2gf4: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2gf4.gif|left|200px]]


{{Structure
==Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14==
|PDB= 2gf4 |SIZE=350|CAPTION= <scene name='initialview01'>2gf4</scene>, resolution 2.07&Aring;
<StructureSection load='2gf4' size='340' side='right'caption='[[2gf4]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> and <scene name='pdbligand=ACT:ACETATE ION'>ACT</scene>
<table><tr><td colspan='2'>[[2gf4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum_NRC-1 Halobacterium salinarum NRC-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GF4 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
|GENE= VNG1086C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2243 Halobacterium sp.])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gf4 OCA], [https://pdbe.org/2gf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gf4 RCSB], [https://www.ebi.ac.uk/pdbsum/2gf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gf4 ProSAT], [https://www.topsan.org/Proteins/NESGC/2gf4 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2GF4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halobacterium_sp. Halobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GF4 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gf4_consurf.spt"</scriptWhenChecked>
[[Category: Halobacterium sp.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Benach, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gf4 ConSurf].
[[Category: Cunningham, K.]]
<div style="clear:both"></div>
[[Category: Forouhar, F F.]]
__TOC__
[[Category: Hunt, J F.]]
</StructureSection>
[[Category: Janjua, H.]]
[[Category: Halobacterium salinarum NRC-1]]
[[Category: Jayaraman, S.]]
[[Category: Large Structures]]
[[Category: Ma, L C.]]
[[Category: Acton TB]]
[[Category: Montelione, G T.]]
[[Category: Benach J]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Cunningham K]]
[[Category: Tong, L.]]
[[Category: Forouhar FF]]
[[Category: Wang, D.]]
[[Category: Hunt JF]]
[[Category: Xiao, R.]]
[[Category: Janjua H]]
[[Category: Zhou, W.]]
[[Category: Jayaraman S]]
[[Category: ACT]]
[[Category: Ma L-C]]
[[Category: CA]]
[[Category: Montelione GT]]
[[Category: hsr14]]
[[Category: Tong L]]
[[Category: nesg]]
[[Category: Wang D]]
[[Category: northeast structural genomics consortium]]
[[Category: Xiao R]]
[[Category: protein structure initiative]]
[[Category: Zhou W]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:03:56 2008''

Latest revision as of 03:58, 21 November 2024

Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14

Structural highlights

2gf4 is a 2 chain structure with sequence from Halobacterium salinarum NRC-1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.07Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gf4, resolution 2.07Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2gf4&oldid=4204370"