2gan: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2gan.gif|left|200px]]
- {{Structure
+==Crystal Structure of a Putative Acetyltransferase from Pyrococcus horikoshii, Northeast Structural Genomics Target JR32.==
-|PDB= 2gan |SIZE=350|CAPTION= <scene name='initialview01'>2gan</scene>, resolution 2.10&Aring;
+<StructureSection load='2gan' size='340' side='right'caption='[[2gan]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>
+<table><tr><td colspan='2'>[[2gan]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GAN FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-|GENE= PH0736' ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70601 Pyrococcus horikoshii OT3])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gan FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gan OCA], [https://pdbe.org/2gan PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gan RCSB], [https://www.ebi.ac.uk/pdbsum/2gan PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gan ProSAT], [https://www.topsan.org/Proteins/NESGC/2gan TOPSAN]</span></td></tr>
+</table>
-'''Crystal Structure of a Putative Acetyltransferase from Pyrococcus horikoshii, Northeast Structural Genomics Target JR32.'''
+== Function ==
+[https://www.uniprot.org/uniprot/O58467_PYRHO O58467_PYRHO]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-GAN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAN OCA].
+Check<jmol>
-[[Category: Pyrococcus horikoshii ot3]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/2gan_consurf.spt"</scriptWhenChecked>
-[[Category: Abashidze, M.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Acton, T B.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Forouhar, F.]]
+  </jmolCheckbox>
-[[Category: Hunt, J F.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gan ConSurf].
-[[Category: Janjua, H.]]
+<div style="clear:both"></div>
-[[Category: Jayaraman, S.]]
+__TOC__
-[[Category: Montelione, G T.]]
+</StructureSection>
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Large Structures]]
-[[Category: Tong, L.]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Xiao, R.]]
+[[Category: Abashidze M]]
-[[Category: EDO]]
+[[Category: Acton TB]]
-[[Category: SO4]]
+[[Category: Forouhar F]]
-[[Category: alpha-beta protein.]]
+[[Category: Hunt JF]]
-[[Category: nesg]]
+[[Category: Janjua H]]
-[[Category: northeast structural genomics consortium]]
+[[Category: Jayaraman S]]
-[[Category: protein structure initiative]]
+[[Category: Montelione GT]]
-[[Category: psi]]
+[[Category: Tong L]]
-[[Category: structural genomic]]
+[[Category: Xiao R]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:02:29 2008''