2g39: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2g39.gif|left|200px]]<br /><applet load="2g39" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2g39, resolution 2.10&Aring;" />
-'''Crystal structure of coenzyme A transferase from Pseudomonas aeruginosa'''<br />
-==About this Structure==
+==Crystal structure of coenzyme A transferase from Pseudomonas aeruginosa==
-G39 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa] with <scene name='pdbligand=EDO:'>EDO</scene> and <scene name='pdbligand=ACY:'>ACY</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G39 OCA].
+<StructureSection load='2g39' size='340' side='right'caption='[[2g39]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2g39]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G39 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g39 OCA], [https://pdbe.org/2g39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g39 RCSB], [https://www.ebi.ac.uk/pdbsum/2g39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g39 ProSAT], [https://www.topsan.org/Proteins/MCSG/2g39 TOPSAN]</span></td></tr>
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g3/2g39_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g39 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pseudomonas aeruginosa]]
-[[Category: Single protein]]
+[[Category: Chang C]]
-[[Category: Chang, C.]]
+[[Category: Edwards A]]
-[[Category: Edwards, A.]]
+[[Category: Evdokimova E]]
-[[Category: Evdokimova, E.]]
+[[Category: Joachimiak A]]
-[[Category: Joachimiak, A.]]
+[[Category: Kudritska M]]
-[[Category: Kudritska, M.]]
+[[Category: Savchenko A]]
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
-[[Category: Savchenko, A.]]
-[[Category: ACY]]
-[[Category: EDO]]
-[[Category: coenzyme a transferase]]
-[[Category: mcsg]]
-[[Category: midwest center for structural genomics]]
-[[Category: protein structure initiative]]
-[[Category: pseudomonas aeruginosa]]
-[[Category: psi]]
-[[Category: structural genomics]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:50:41 2008''