2fdr: Difference between revisions

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[[Image:2fdr.png|left|200px]]


{{STRUCTURE_2fdr|  PDB=2fdr  |  SCENE=  }}
==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==
 
<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
===Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
[[Category: Agrobacterium tumefaciens str. c58]]
</table>
[[Category: Edwards, A.]]
== Evolutionary Conservation ==
[[Category: Joachimiak, A.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
Check<jmol>
[[Category: Nocek, B.]]
  <jmolCheckbox>
[[Category: Savchenko, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
[[Category: Xu, X.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Zheng, H.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Agrobacterium tumefacien]]
  </jmolCheckbox>
[[Category: Conserved hypothetical]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fdr ConSurf].
[[Category: Had-superfamily hydrolase]]
<div style="clear:both"></div>
[[Category: Mcsg]]
__TOC__
[[Category: Midwest center for structural genomic]]
</StructureSection>
[[Category: Protein structure initiative]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Psi]]
[[Category: Large Structures]]
[[Category: Putative b-phosphoglucomutase]]
[[Category: Edwards A]]
[[Category: Sad]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Nocek B]]
[[Category: Unknown function]]
[[Category: Savchenko A]]
[[Category: Xu X]]
[[Category: Zheng H]]

Latest revision as of 03:55, 21 November 2024

Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58

Structural highlights

2fdr is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fdr, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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