2dx6: Difference between revisions

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[[Image:2dx6.jpg|left|200px]]


{{Structure
==Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8==
|PDB= 2dx6 |SIZE=350|CAPTION= <scene name='initialview01'>2dx6</scene>, resolution 1.78&Aring;
<StructureSection load='2dx6' size='340' side='right'caption='[[2dx6]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2dx6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DX6 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dx6 OCA], [https://pdbe.org/2dx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dx6 RCSB], [https://www.ebi.ac.uk/pdbsum/2dx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dx6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dx6 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dx6 OCA], [http://www.ebi.ac.uk/pdbsum/2dx6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2dx6 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q5SM11_THET8 Q5SM11_THET8]
 
== Evolutionary Conservation ==
'''Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/2dx6_consurf.spt"</scriptWhenChecked>
2DX6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DX6 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Thermus thermophilus]]
  </jmolCheckbox>
[[Category: Kishishita, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dx6 ConSurf].
[[Category: Kuramitsu, S.]]
<div style="clear:both"></div>
[[Category: Murayama, K.]]
__TOC__
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</StructureSection>
[[Category: Shirouzu, M.]]
[[Category: Large Structures]]
[[Category: Terada, T.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Yokoyama, S.]]
[[Category: Kishishita S]]
[[Category: conserved hypothetical protein]]
[[Category: Kuramitsu S]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Murayama K]]
[[Category: nppsfa]]
[[Category: Shirouzu M]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Terada T]]
[[Category: rsgi]]
[[Category: Yokoyama S]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:40:52 2008''

Latest revision as of 10:56, 30 October 2024

Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8

Structural highlights

2dx6 is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.78Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SM11_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2dx6, resolution 1.78Å

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