2dc0: Difference between revisions
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==Crystal structure of amidase== | ==Crystal structure of amidase== | ||
<StructureSection load='2dc0' size='340' side='right' caption='[[2dc0]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='2dc0' size='340' side='right'caption='[[2dc0]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dc0]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2dc0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DC0 FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<table> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dc0 OCA], [https://pdbe.org/2dc0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dc0 RCSB], [https://www.ebi.ac.uk/pdbsum/2dc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dc0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dc0 TOPSAN]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q5SHD3_THET8 Q5SHD3_THET8] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/2dc0_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/2dc0_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dc0 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
[[Category: Ebihara | [[Category: Ebihara A]] | ||
[[Category: Kanagawa | [[Category: Kanagawa M]] | ||
[[Category: Kuramitsu | [[Category: Kuramitsu S]] | ||
[[Category: Kuroishi | [[Category: Kuroishi C]] | ||
[[Category: Nakagawa | [[Category: Nakagawa N]] | ||
[[Category: Ohshima | [[Category: Ohshima T]] | ||
[[Category: Sakuraba H]] | |||
[[Category: Sakuraba | [[Category: Satoh S]] | ||
[[Category: Satoh | [[Category: Yokoyama S]] | ||
[[Category: Yokoyama | |||
Latest revision as of 10:55, 30 October 2024
Crystal structure of amidaseCrystal structure of amidase
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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