2cvb: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2cvb.gif|left|200px]]<br /><applet load="2cvb" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2cvb, resolution 1.80&Aring;" />
-'''Crystal structure of a thioredoxin-like protein from Thermus thermophilus HB8'''<br />
-==About this Structure==
+==Crystal structure of a thioredoxin-like protein from Thermus thermophilus HB8==
-CVB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CVB OCA].
+<StructureSection load='2cvb' size='340' side='right'caption='[[2cvb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Thermus thermophilus]]
+<table><tr><td colspan='2'>[[2cvb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CVB FirstGlance]. <br>
-[[Category: Ebihara, A.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-[[Category: Kuramitsu, S.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cvb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cvb OCA], [https://pdbe.org/2cvb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cvb RCSB], [https://www.ebi.ac.uk/pdbsum/2cvb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cvb ProSAT], [https://www.topsan.org/Proteins/RSGI/2cvb TOPSAN]</span></td></tr>
-[[Category: Yokoyama, S.]]
+</table>
-[[Category: redox protein]]
+== Evolutionary Conservation ==
-[[Category: riken structural genomics/proteomics initiative]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: rsgi]]
+Check<jmol>
-[[Category: structural genomics]]
+  <jmolCheckbox>
-[[Category: thioredoxin]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/2cvb_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:48:41 2008''
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cvb ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Thermus thermophilus HB8]]
+[[Category: Ebihara A]]
+[[Category: Kuramitsu S]]
+[[Category: Yokoyama S]]