2csl: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2csl.png|left|200px]]
-{{STRUCTURE_2csl|  PDB=2csl  |  SCENE=  }}
+==Crystal structure of TTHA0137 from Thermus Thermophilus HB8==
+<StructureSection load='2csl' size='340' side='right'caption='[[2csl]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-===Crystal structure of TTHA0137 from Thermus Thermophilus HB8===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2csl]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CSL FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[2csl]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSL OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2csl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2csl OCA], [https://pdbe.org/2csl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2csl RCSB], [https://www.ebi.ac.uk/pdbsum/2csl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2csl ProSAT], [https://www.topsan.org/Proteins/RSGI/2csl TOPSAN]</span></td></tr>
-[[Category: Thermus thermophilus]]
+</table>
-[[Category: Chen, L.]]
+== Evolutionary Conservation ==
-[[Category: Chrzas, J.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Jin, Z.]]
+Check<jmol>
-[[Category: Kuramitsu, S.]]
+  <jmolCheckbox>
-[[Category: Liu, Z J.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/2csl_consurf.spt"</scriptWhenChecked>
-[[Category: Murayama, K.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Shirouzu, M.]]
+  </jmolCheckbox>
-[[Category: Terada, T.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2csl ConSurf].
-[[Category: Wang, B C.]]
+<div style="clear:both"></div>
-[[Category: Wang, H.]]
+__TOC__
-[[Category: Yokoyama, S.]]
+</StructureSection>
-[[Category: National project on protein structural and functional analyse]]
+[[Category: Large Structures]]
-[[Category: Nppsfa]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Chen L]]
-[[Category: Rsgi]]
+[[Category: Chrzas J]]
-[[Category: Structural genomic]]
+[[Category: Jin Z]]
-[[Category: Unknown function]]
+[[Category: Kuramitsu S]]
+[[Category: Liu ZJ]]
+[[Category: Murayama K]]
+[[Category: Shirouzu M]]
+[[Category: Terada T]]
+[[Category: Wang BC]]
+[[Category: Wang H]]
+[[Category: Yokoyama S]]