2be3: Difference between revisions

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New page: left|200px<br /><applet load="2be3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2be3, resolution 2.40Å" /> '''Structure of a GTP P...
 
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[[Image:2be3.gif|left|200px]]<br /><applet load="2be3" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2be3, resolution 2.40&Aring;" />
'''Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae'''<br />


==About this Structure==
==Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae==
2BE3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with <scene name='pdbligand=CL:'>CL</scene>, <scene name='pdbligand=PG4:'>PG4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/GTP_diphosphokinase GTP diphosphokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.6.5 2.7.6.5] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BE3 OCA].
<StructureSection load='2be3' size='340' side='right'caption='[[2be3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
[[Category: GTP diphosphokinase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2be3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BE3 FirstGlance]. <br>
[[Category: Streptococcus pneumoniae]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
[[Category: Cuff, M.E.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
[[Category: Hatzos, C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2be3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2be3 OCA], [https://pdbe.org/2be3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2be3 RCSB], [https://www.ebi.ac.uk/pdbsum/2be3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2be3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2be3 TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
== Function ==
[[Category: CL]]
[https://www.uniprot.org/uniprot/A0A0H2UPY1_STRPN A0A0H2UPY1_STRPN]  
[[Category: GOL]]
== Evolutionary Conservation ==
[[Category: PG4]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: gtp]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: midwest center for structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2be3_consurf.spt"</scriptWhenChecked>
[[Category: protein structure initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: psi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: pyrophosphokinase]]
  </jmolCheckbox>
[[Category: streptococcus pneumoniae]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2be3 ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:22:37 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Cuff ME]]
[[Category: Hatzos C]]
[[Category: Joachimiak A]]

Latest revision as of 10:53, 30 October 2024

Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniaeStructure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae

Structural highlights

2be3 is a 2 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2UPY1_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2be3, resolution 2.40Å

Drag the structure with the mouse to rotate

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OCA
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