2ayt: Difference between revisions

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 ==The crystal structure of a protein disulfide oxidoreductase from aquifex aeolicus==
-<StructureSection load='2ayt' size='340' side='right' caption='[[2ayt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='2ayt' size='340' side='right'caption='[[2ayt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2ayt]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AYT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AYT FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2ayt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AYT FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a8l|1a8l]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ayt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ayt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ayt RCSB], [http://www.ebi.ac.uk/pdbsum/2ayt PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ayt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ayt OCA], [https://pdbe.org/2ayt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ayt RCSB], [https://www.ebi.ac.uk/pdbsum/2ayt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ayt ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/O66753_AQUAE O66753_AQUAE]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ay/2ayt_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ay/2ayt_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ayt ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 25: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2ayt" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Protein disulfide oxidoreductase|Protein disulfide oxidoreductase]]
+*[[Protein disulfide oxidoreductase 3D structures|Protein disulfide oxidoreductase 3D structures]]
 == References ==
 <references/>
@@ Line 33: / Line 37: @@
 </StructureSection>
 [[Category: Aquifex aeolicus]]
-[[Category: Ambrosio, K D]]
+[[Category: Large Structures]]
-[[Category: Bartolucci, S]]
+[[Category: Bartolucci S]]
-[[Category: Pedone, C]]
+[[Category: D'Ambrosio K]]
-[[Category: Pedone, E]]
+[[Category: De Simone G]]
-[[Category: Rossi, M]]
+[[Category: Pedone C]]
-[[Category: Simone, G De]]
+[[Category: Pedone E]]
-[[Category: Glutaredoxin]]
+[[Category: Rossi M]]
-[[Category: Oxidoreductase]]
-[[Category: Protein disulfide oxidoreductase]]
-[[Category: Thioredoxin fold]]