2pq7: Difference between revisions

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[[Image:2pq7.png|left|200px]]


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==Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution==
The line below this paragraph, containing "STRUCTURE_2pq7", creates the "Structure Box" on the page.
<StructureSection load='2pq7' size='340' side='right'caption='[[2pq7]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pq7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_Thermotogales_bacterium Uncultured Thermotogales bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PQ7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_2pq7|  PDB=2pq7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pq7 OCA], [https://pdbe.org/2pq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pq7 RCSB], [https://www.ebi.ac.uk/pdbsum/2pq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pq7 ProSAT], [https://www.topsan.org/Proteins/JCSG/2pq7 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q1EM40_9BACT Q1EM40_9BACT]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2PQ7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Uncultured_thermotogales_bacterium Uncultured thermotogales bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PQ7 OCA].  
Check<jmol>
[[Category: Uncultured thermotogales bacterium]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pq/2pq7_consurf.spt"</scriptWhenChecked>
[[Category: 104161995]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Hd domain]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Jcsg]]
  </jmolCheckbox>
[[Category: Joint center for structural genomic]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pq7 ConSurf].
[[Category: Predicted hd superfamily hydrolase]]
<div style="clear:both"></div>
[[Category: Protein structure initiative]]
__TOC__
[[Category: Psi-2]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Large Structures]]
 
[[Category: Uncultured Thermotogales bacterium]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:46:18 2008''

Latest revision as of 04:19, 21 November 2024

Crystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolutionCrystal structure of predicted HD superfamily hydrolase (104161995) from uncultured Thermotogales bacterium at 1.45 A resolution

Structural highlights

2pq7 is a 1 chain structure with sequence from Uncultured Thermotogales bacterium. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.45Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q1EM40_9BACT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pq7, resolution 1.45Å

Drag the structure with the mouse to rotate

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OCA
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