2ob5: Difference between revisions

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[[Image:2ob5.gif|left|200px]]


{{Structure
==Crystal structure of protein Atu2016, putative sugar binding protein==
|PDB= 2ob5 |SIZE=350|CAPTION= <scene name='initialview01'>2ob5</scene>, resolution 1.60&Aring;
<StructureSection load='2ob5' size='340' side='right'caption='[[2ob5]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE= AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4154 FucU]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [https://pdbe.org/2ob5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/A9CIE0_AGRFC A9CIE0_AGRFC]
 
== Evolutionary Conservation ==
'''Crystal structure of protein Atu2016, putative sugar binding protein'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2ob5_consurf.spt"</scriptWhenChecked>
2OB5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Agrobacterium tumefaciens]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Chang, C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ob5 ConSurf].
[[Category: Edwards, A M.]]
<div style="clear:both"></div>
[[Category: Gu, J.]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Xu, X.]]
[[Category: Chang C]]
[[Category: agrobacterium tumefacien]]
[[Category: Edwards AM]]
[[Category: mcsg]]
[[Category: Gu J]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: protein structure initiative]]
[[Category: Savchenko A]]
[[Category: psi-2]]
[[Category: Xu X]]
[[Category: putavite sugar binding protein]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:15:17 2008''

Latest revision as of 12:23, 6 November 2024

Crystal structure of protein Atu2016, putative sugar binding proteinCrystal structure of protein Atu2016, putative sugar binding protein

Structural highlights

2ob5 is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CIE0_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ob5, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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