2hrg: Difference between revisions

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-[[Image:2hrg.jpg|left|200px]]<br /><applet load="2hrg" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2hrg, resolution 1.58&Aring;" />
-'''Crystal Structure of Blue Laccase from Trametes trogii complexed with p-methylbenzoate'''<br />
-==About this Structure==
+==Crystal Structure of Blue Laccase from Trametes trogii complexed with p-methylbenzoate==
-HRG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Funalia_trogii Funalia trogii] with <scene name='pdbligand=CBS:'>CBS</scene>, <scene name='pdbligand=CU:'>CU</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=4MA:'>4MA</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HRG OCA].
+<StructureSection load='2hrg' size='340' side='right'caption='[[2hrg]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
-[[Category: Funalia trogii]]
+== Structural highlights ==
-[[Category: Laccase]]
+<table><tr><td colspan='2'>[[2hrg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Coriolopsis_trogii Coriolopsis trogii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HRG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HRG FirstGlance]. <br>
-[[Category: Single protein]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
-[[Category: Briganti, F.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4MA:4-METHYLBENZOIC+ACID'>4MA</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-[[Category: Ferraroni, M.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hrg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hrg OCA], [https://pdbe.org/2hrg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hrg RCSB], [https://www.ebi.ac.uk/pdbsum/2hrg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hrg ProSAT]</span></td></tr>
-[[Category: Gullotto, A.]]
+</table>
-[[Category: Matera, I.]]
+== Function ==
-[[Category: Scozzafava, A.]]
+[https://www.uniprot.org/uniprot/Q9HDQ0_9APHY Q9HDQ0_9APHY]
-[[Category: Tilli, S.]]
+== Evolutionary Conservation ==
-[[Category: 4MA]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: CA]]
+Check<jmol>
-[[Category: CBS]]
+  <jmolCheckbox>
-[[Category: CU]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hr/2hrg_consurf.spt"</scriptWhenChecked>
-[[Category: GOL]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: laccase]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: lignin degradation]]
+  </jmolCheckbox>
-[[Category: oxidoreductase]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hrg ConSurf].
+<div style="clear:both"></div>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:44:55 2008''
+==See Also==
+*[[Laccase 3D structures|Laccase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Coriolopsis trogii]]
+[[Category: Large Structures]]
+[[Category: Briganti F]]
+[[Category: Ferraroni M]]
+[[Category: Gullotto A]]
+[[Category: Matera I]]
+[[Category: Scozzafava A]]
+[[Category: Tilli S]]