2rdy: Difference between revisions

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-[[Image:2rdy.jpg|left|200px]]
- {{Structure
+==Crystal structure of a putative glycoside hydrolase family protein from Bacillus halodurans==
-|PDB= 2rdy |SIZE=350|CAPTION= <scene name='initialview01'>2rdy</scene>, resolution 2.03&Aring;
+<StructureSection load='2rdy' size='340' side='right'caption='[[2rdy]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RDY FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03&#8491;</td></tr>
-|GENE= BH0842 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|DOMAIN=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rdy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdy OCA], [https://pdbe.org/2rdy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rdy RCSB], [https://www.ebi.ac.uk/pdbsum/2rdy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rdy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rdy TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rdy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdy OCA], [http://www.ebi.ac.uk/pdbsum/2rdy PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2rdy RCSB]</span>
+</table>
-}}
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-'''Crystal structure of a putative glycoside hydrolase family protein from Bacillus halodurans'''
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdy_consurf.spt"</scriptWhenChecked>
-==About this Structure==
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-RDY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDY OCA].
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Bacteria]]
+  </jmolCheckbox>
-[[Category: Single protein]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rdy ConSurf].
-[[Category: Burley, S K.]]
+<div style="clear:both"></div>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+__TOC__
-[[Category: Sugadev, R.]]
+</StructureSection>
-[[Category: Swaminathan, S.]]
+[[Category: Large Structures]]
-[[Category: 10436a]]
+[[Category: Burley SK]]
-[[Category: hydrolase]]
+[[Category: Sugadev R]]
-[[Category: new york structural genomix research consortium]]
+[[Category: Swaminathan S]]
-[[Category: nysgxrc]]
-[[Category: protein structure initiative]]
-[[Category: psi-ii]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:45:59 2008''