2qgu: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2qgu.gif|left|200px]]<br /><applet load="2qgu" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2qgu, resolution 1.50&Aring;" />
-'''Three-dimensional structure of the phospholipid-binding protein from Ralstonia solanacearum Q8XV73_RALSQ in complex with a phospholipid at the resolution 1.53 A. Northeast Structural Genomics Consortium target RsR89'''<br />
-==About this Structure==
+==Three-dimensional structure of the phospholipid-binding protein from Ralstonia solanacearum Q8XV73_RALSQ in complex with a phospholipid at the resolution 1.53 A. Northeast Structural Genomics Consortium target RsR89==
-QGU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_solanacearum_gmi1000 Ralstonia solanacearum gmi1000] with <scene name='pdbligand=PEF:'>PEF</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGU OCA].
+<StructureSection load='2qgu' size='340' side='right'caption='[[2qgu]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-[[Category: Ralstonia solanacearum gmi1000]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[2qgu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ralstonia_solanacearum_GMI1000 Ralstonia solanacearum GMI1000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QGU FirstGlance]. <br>
-[[Category: Acton, T.B.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-[[Category: B., Rost.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene></td></tr>
-[[Category: Baran, M.C.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qgu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgu OCA], [https://pdbe.org/2qgu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qgu RCSB], [https://www.ebi.ac.uk/pdbsum/2qgu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgu ProSAT], [https://www.topsan.org/Proteins/NESGC/2qgu TOPSAN]</span></td></tr>
-[[Category: Chen, C.X.]]
+</table>
-[[Category: Chen, Y.]]
+== Function ==
-[[Category: Cunningham, K.]]
+[https://www.uniprot.org/uniprot/Q8XV73_RALN1 Q8XV73_RALN1]
-[[Category: Fang, Y.]]
+== Evolutionary Conservation ==
-[[Category: Hunt, J.F.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Jayaraman, S.]]
+Check<jmol>
-[[Category: Kuzin, A.P.]]
+  <jmolCheckbox>
-[[Category: Liu, J.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgu_consurf.spt"</scriptWhenChecked>
-[[Category: Ma, L-C.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Montelione, G.T.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+  </jmolCheckbox>
-[[Category: Tong, L.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qgu ConSurf].
-[[Category: Xiao, R.]]
+<div style="clear:both"></div>
-[[Category: PEF]]
+__TOC__
-[[Category: nesg]]
+</StructureSection>
-[[Category: northeast structural genomics consortium]]
+[[Category: Large Structures]]
-[[Category: protein structure initiative]]
+[[Category: Ralstonia solanacearum GMI1000]]
-[[Category: psi-2]]
+[[Category: Acton TB]]
-[[Category: q8xv73]]
+[[Category: Baran MC]]
-[[Category: rsr89]]
+[[Category: Chen CX]]
-[[Category: structural genomics]]
+[[Category: Chen Y]]
-[[Category: unknown function]]
+[[Category: Cunningham K]]
-[[Category: x-ray]]
+[[Category: Fang Y]]
+[[Category: Hunt JF]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:58:08 2008''
+[[Category: Jayaraman S]]
+[[Category: Kuzin AP]]
+[[Category: Liu J]]
+[[Category: Ma L-C]]
+[[Category: Montelione GT]]
+[[Category: Rost B]]
+[[Category: Tong L]]
+[[Category: Xiao R]]